PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.1192s0008.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ERF
Protein Properties Length: 289aa    MW: 32396.9 Da    PI: 4.7011
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.1192s0008.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP248.12.8e-1586134254
                  AP2   2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkle 54 
                           ykGVr++k +g+++AeIrd +     r +r++lg+f+t eeAa+a+ +   +++
  Kalax.1192s0008.1.p  86 IYKGVRRRK-WGKFAAEIRDpF-----RkTRVWLGTFDTGEEAAAAYARKEAEYK 134
                          69****998.**********77.....45******************88777765 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.18E-1685118No hitNo description
SuperFamilySSF541712.29E-1686135IPR016177DNA-binding domain
SMARTSM003809.3E-1486135IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.7E-2086129IPR001471AP2/ERF domain
PfamPF008472.0E-1086128IPR001471AP2/ERF domain
PROSITE profilePS5103218.486144IPR001471AP2/ERF domain
PRINTSPR003678.5E-108798IPR001471AP2/ERF domain
PRINTSPR003678.5E-10109125IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    Send to blast
MRPPRGKHVP ETIKKLRVIC SDPYATESDS SSGEEDEFTG GRRRPCKRYV QEILIRDDIN  60
KEEPGKPDDQ KPPGEKFQPK GKSSTIYKGV RRRKWGKFAA EIRDPFRKTR VWLGTFDTGE  120
EAAAAYARKE AEYKKLLAEK RSFSVTTCSP FLTPPRTSSS DDTADFCSLA SPSSVLDVTR  180
PAPRPDHCRK TWDPCKEANS FMMEEEELIS AFLKEPALSP ELSSVFDDSK LFESNQYLSG  240
STPDLLASDS STDSGQEADF DSLMDSEFGW GNDDFTWIDE TLNVEPST*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18793KGVRRRK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61630.14e-14cytokinin response factor 6